BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A06LP1|AL430636
(455 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 503 e-143
>3x_Contig1105
Length = 3123
Score = 503 bits (241), Expect = e-143
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 gatccgcgggattatatactccttcctttctatgatatactacgcttatagtattataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 gatccgcgggattatatactccttcctttctatgatatactacgcttatagtattataaa 1715
Query: 61 aataacttcccgattagcatgctatgctaatcgggaaatatatctataattaattaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 aataacttcccgattagcatgctatgctaatcgggaaatatatctataattaattaccca 1775
Query: 121 gccataatatgctatattatggctgggtatatattatatctattatcatattattcggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 gccataatatgctatattatggctgggtatatattatatctattatcatattattcggta 1835
Query: 181 ttctttggcactattaatattatatatacctatatatataataaaataataaatatataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1836 ttctttggcactattaatattatatatacctatatatataataaaataataaatatataa 1895
Query: 241 t 241
|
Sbjct: 1896 t 1896
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.721 1.37
Gapped
Lambda K H
1.45 0.721 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,080
Number of Sequences: 1807
Number of extensions: 13080
Number of successful extensions: 3148
Number of sequences better than 1.0e-20: 1
length of query: 455
length of database: 10,358,551
effective HSP length: 15
effective length of query: 440
effective length of database: 10,331,446
effective search space: 4545836240
effective search space used: 4545836240
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 47 (98.6 bits)